iTunes sync

[azonie]

Questions on how iPhone syncs with iTunes. When I open iTunes and then connect iPhone it starts sync automatically without option to chose what to sync. Also only app showing in iTunes is Vz contact. What about all the apps I have installed/purchase on the iPhone from the app store. How do I back those up?
I did notice if I go to my account in iTunes these apps are showing in history.

 

[Kimsland]

I found this excellent tutorial on backing up all your Apps, then using iTunes to manage your layout.
How To Sync Apps On iPhone Without Deleting Apps Already On iPhone

Basically, it's File > Transfer Purchases From IPhone

See if that helps